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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3811935_3812357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3811935 - 3812357

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

AACTCCTCAGAG

Flanking Amino Acid:

IPPDGEFELMRYRTTKDIIL

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

0.58

0.9

69.9

36.6

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

45.8

-0.4

1.9

49.01

Associated Gene:

Gene:

AP2M1

Ensembl Gene ID:

ENSAPLG00000006667

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006946

3810576 - 3825439

14864