Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_3844118_3844432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3844118 - 3844432

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TCCATCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GGTGTCTTACTT

Flanking Amino Acid:

LNIITVTLNMEKYNFLGISI

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

76.2

0.59

0.8

69.5

31.1

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

53.1

0.17

1.7

68.54

42.9

Associated Gene:

Gene:

DVL3

Ensembl Gene ID:

ENSAPLG00000005855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045015

3838193 - 3851339

13147

ENSAPLT00000033097

3838193 - 3851339

13147

ENSAPLT00000006107

3839666 - 3864391

24726