Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_3884260_3884895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3884260 - 3884895

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TACCTCCTAATC

Flanking Amino Acid:

NKEENKVKLKGYNKKDVGSE

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

67.7

37.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

83.3

0.75

0.9

80.8

36.8

Minor 5ss

35.9

-1.6

3.3

46.1

49.1

Minor BPS

51.9

0.04

1.7

61.31

Associated Gene:

Gene:

EIF2B5

Ensembl Gene ID:

ENSAPLG00000005467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005681

3872596 - 3890956

18361