Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_3914983_3919634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3914983 - 3919634

Intron Length:

4652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTCTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

GTTCATGCAAGT

Flanking Amino Acid:

ITQLAGFSGPAFVVKHLLEY

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

84.8

0.86

85.7

34.9

Major PPT

85.6

0.8

0.6

81.9

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

38.7

-0.7

2.3

59.31

43.7

Associated Gene:

Gene:

ABCC5

Ensembl Gene ID:

ENSAPLG00000003817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033722

3900139 - 3948670

48532

ENSAPLT00000004044

3908383 - 3948554

40172