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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3921920_3922568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3921920 - 3922568

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

ATGTCATTCACT

Flanking Amino Acid:

ILGYDLTAAQAFTVVTVFNS

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

38.1

-1.3

3.4

55.9

48.3

Minor BPS

58.9

0.36

2.1

79.61

42.2

Associated Gene:

Gene:

ABCC5

Ensembl Gene ID:

ENSAPLG00000003817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033722

3900139 - 3948670

48532

ENSAPLT00000004044

3908383 - 3948554

40172