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Intron Name: Anas_platyrhynchos_platyrhynchos_9_392425_397570_F

Intron Information:

Intron Rank:

148007

Intron Class:

major

Intron Phase:

Intron Coordinates:

392425 - 397570

Intron Length:

5146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATGCTATTGATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

31.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

78.3

0.64

0.8

77.4

31.3

Minor 5ss

-1.8

2.7

42.8

36.9

Minor BPS

48.8

-0.1

1.5

58.42

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044474

390658 - 406885

16228

ENSAPLT00000023747

392226 - 426243

34018