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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3924776_3926401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3924776 - 3926401

Intron Length:

1626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

AGTACCGTATAT

Flanking Amino Acid:

LYNIDLEIEKGKLVGICGSV

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

78.6

0.64

0.8

73.6

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

44.7

-0.3

2.3

65.52

44.3

Associated Gene:

Gene:

ABCC5

Ensembl Gene ID:

ENSAPLG00000003817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033722

3900139 - 3948670

48532

ENSAPLT00000004044

3908383 - 3948554

40172