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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3933830_3933974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3933830 - 3933974

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TATCACTTAAAA

Flanking Amino Acid:

VLFTVLHVVSRVFIRELKRL

Intron Amino Acid Position:

1001

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

85.9

0.81

0.7

77.8

31.1

Minor 5ss

-1.9

3.1

41.6

Minor BPS

63.4

0.42

1.6

73.22

37.3

Associated Gene:

Gene:

ABCC5

Ensembl Gene ID:

ENSAPLG00000003817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033722

3900139 - 3948670

48532

ENSAPLT00000004044

3908383 - 3948554

40172