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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3936164_3936399_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3936164 - 3936399

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAGAA

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

SVERIDHYIKTLSLEAPARI

Intron Amino Acid Position:

1137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

49.3

-0

0.9

44.7

28.3

Major PPT

84.1

0.77

0.9

86.1

25.6

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

ABCC5

Ensembl Gene ID:

ENSAPLG00000003817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004044

3908383 - 3948554

40172

ENSAPLT00000033722

3900139 - 3948670

48532