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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3945924_3948494_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3945924 - 3948494

Intron Length:

2571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGCTGTC

5'SS Class:

weak_major

3'SS Sequence:

CTTCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CAATCCTGATCT

Flanking Amino Acid:

YAMFAAAENKAGSSSNFVDA

Intron Amino Acid Position:

1401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.5

65.2

40.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

88.2

0.86

0.7

80.6

31.5

Minor 5ss

36.8

-1.5

3.5

52.5

44.7

Minor BPS

55.9

0.26

1.8

71.28

44.9

Associated Gene:

Gene:

ABCC5

Ensembl Gene ID:

ENSAPLG00000003817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033722

3900139 - 3948670

48532

ENSAPLT00000004044

3908383 - 3948554

40172