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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3957387_3958045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3957387 - 3958045

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGGTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

ATTTAGTCAGTT

Flanking Amino Acid:

VKCTYSATVKAPAGMQVLMS

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.5

32.8

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

77.9

0.63

0.9

73.5

41.8

Minor 5ss

29.5

-2.3

3.5

40.1

46.3

Minor BPS

42.9

-0.4

2.4

67.76

43.2

Associated Gene:

Gene:

RNPEPL1

Ensembl Gene ID:

ENSAPLG00000003566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003668

3951207 - 3967345

16139