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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3958198_3958634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3958198 - 3958634

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TGTTTTCTGACA

Flanking Amino Acid:

GDLIHADIGPRSRVWAEPCL

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

79.8

0.67

76.5

37.7

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

57.6

0.23

1.6

71.22

34.4

Associated Gene:

Gene:

RNPEPL1

Ensembl Gene ID:

ENSAPLG00000003566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003668

3951207 - 3967345

16139