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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3959829_3962035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3959829 - 3962035

Intron Length:

2207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATAGCTG

5'SS Class:

major

3'SS Sequence:

CTGTCTGGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TGTCCCACAGCT

Flanking Amino Acid:

AQRRITTETYGAAFTCLETA

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.1

52.1

44.3

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

60.3

0.23

1.2

57.1

43.3

Minor 5ss

39.9

-1.1

3.4

52.1

Minor BPS

47.6

-0.1

72.42

43.5

Associated Gene:

Gene:

RNPEPL1

Ensembl Gene ID:

ENSAPLG00000003566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003668

3951207 - 3967345

16139