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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3966090_3966251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3966090 - 3966251

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCTCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTCAT

U12 Branch Point Sequence:

CAGGTCATAGTT

Flanking Amino Acid:

RLLDGSPLPHEVIKKLSECY

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

82.3

Major BPS

60.9

0.27

1.3

63.1

44.4

Major PPT

77.2

0.61

0.9

73.7

36.9

Minor 5ss

33.1

-1.9

2.7

40.7

39.2

Minor BPS

42.6

-0.4

1.8

52.98

42.7

Associated Gene:

Gene:

RNPEPL1

Ensembl Gene ID:

ENSAPLG00000003566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003668

3951207 - 3967345

16139