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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3977045_3977584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3977045 - 3977584

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGTA

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTTCTAATC

Flanking Amino Acid:

ISCSVLNSRQGASELGEFHA

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

75.2

35.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

94.2

0.99

0.5

93.1

Minor 5ss

39.6

-1.2

3.5

48.2

Minor BPS

0.33

1.6

71.55

33.5

Associated Gene:

Gene:

CAPN10

Ensembl Gene ID:

ENSAPLG00000003326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030876

3973571 - 3984915

11345

ENSAPLT00000003405

3973571 - 3984398

10828

ENSAPLT00000032201

3973571 - 3984398

10828