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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3981151_3983181_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3981151 - 3983181

Intron Length:

2031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTATGTTTGATA

Flanking Amino Acid:

RVFSTGRISLSEVKPPPPDA

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

71.7

0.49

41.8

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

58.3

0.25

1.7

70.27

36.4

Associated Gene:

Gene:

CAPN10

Ensembl Gene ID:

ENSAPLG00000003326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030876

3973571 - 3984915

11345

ENSAPLT00000003405

3973571 - 3984398

10828

ENSAPLT00000032201

3973571 - 3984398

10828