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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3988513_3989352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3988513 - 3989352

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAGAAT

5'SS Class:

major

3'SS Sequence:

CTTCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAA

U12 Branch Point Sequence:

TCACATAGAAAA

Flanking Amino Acid:

TTLMGFHIKKGTLLLPNLHS

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

73.7

36.4

Major BPS

0.17

0.9

30.8

Major PPT

89.1

0.88

0.6

84.3

23.6

Minor 5ss

39.4

-1.2

3.3

56.4

Minor BPS

39.5

-0.8

1.7

46.28

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002431

3986865 - 3995327

8463

ENSAPLT00000023431

3984969 - 3993413

8445