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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3989541_3990173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3989541 - 3990173

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ATAAATTTAAAT

Flanking Amino Acid:

LYMVKYPEIQERVQREIEAA

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

83.8

0.76

0.8

77.8

35.5

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

54.4

0.22

1.6

70.8

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023431

3984969 - 3993413

8445

ENSAPLT00000002431

3986865 - 3995327

8463