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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3990316_3990544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3990316 - 3990544

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ATATATTCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TCCTTGTGAATA

Flanking Amino Acid:

IDFYLAQIEKTKDDPTSTFN

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

88.1

25.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

76.8

0.6

0.9

69.8

40.5

Minor 5ss

-0.9

2.8

55.1

35.9

Minor BPS

47.3

-0.2

2.1

58.85

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002431

3986865 - 3995327

8463