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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3990367_3990631_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3990367 - 3990631

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTTATGAAT

5'SS Class:

weak_major

3'SS Sequence:

TACATGACCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATCCATTAAAA

Flanking Amino Acid:

FAFNDFMHNLVSLKISTSQS

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.2

59.1

39.2

Major BPS

100

1.24

0.5

100

Major PPT

46.2

-0.2

1.7

46.6

Minor 5ss

32.2

-2

3.1

43.3

38.9

Minor BPS

55.1

0.16

1.7

65.11

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023431

3984969 - 3993413

8445