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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3991135_3992621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3991135 - 3992621

Intron Length:

1487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCA

5'SS Class:

strong_major

3'SS Sequence:

CCTATATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

CTGTTCAGAAAT

Flanking Amino Acid:

HLLDIFANTKGKPFDPRTFI

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

73.8

30.8

Major BPS

82.3

0.8

83.6

25.8

Major PPT

74.8

0.56

0.9

68.1

36.4

Minor 5ss

37.6

-1.4

3.1

48.6

47.1

Minor BPS

47.7

-0

1.8

66.69

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023431

3984969 - 3993413

8445

ENSAPLT00000002431

3986865 - 3995327

8463