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Intron Name: Anas_platyrhynchos_platyrhynchos_9_3992772_3993286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3992772 - 3993286

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

CGGCAATGAAAT

Flanking Amino Acid:

PFYRDMMGEKGIFLTSGHTW

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.1

35.1

Major BPS

0.3

62.3

30.4

Major PPT

79.9

0.67

0.9

37.3

Minor 5ss

30.7

-2.2

3.7

46.1

49.1

Minor BPS

40.2

-0.6

1.8

51.25

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002431

3986865 - 3995327

8463