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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4005262_4006683_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4005262 - 4006683

Intron Length:

1422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATTGTGC

5'SS Class:

weak_major

3'SS Sequence:

TTGGGGTGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TATCCCTGATTT

Flanking Amino Acid:

YLISYIFLHLFLKLQWKSRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.1

37.4

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

64.6

0.33

1.1

57.5

47.4

Minor 5ss

45.8

-0.4

3.1

63.9

42.3

Minor BPS

57.1

0.3

1.7

76.02

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046958

4005223 - 4015116

9894