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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4006758_4007834_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4006758 - 4007834

Intron Length:

1077

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCGGATAAA

5'SS Class:

major

3'SS Sequence:

TTTCTCCAATGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCATCAT

U12 Branch Point Sequence:

GTTTCTCCAATG

Flanking Amino Acid:

PIPLPIVGGVCIFCHWSNLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.2

56.2

40.7

Major BPS

63.3

0.33

1.2

65.6

39.7

Major PPT

53.5

0.08

1.7

67.9

37.9

Minor 5ss

17.4

-3.8

3.4

19.9

31.8

Minor BPS

49.5

-0.1

1.9

61.15

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000594

4006633 - 4015116

8484