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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4008627_4009133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4008627 - 4009133

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGCCAC

5'SS Class:

major

3'SS Sequence:

TGTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTTGGTGACA

Flanking Amino Acid:

HLVKFFKDKDGEAVDPSFPI

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

57.6

41.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.5

0.73

0.9

76.5

37.5

Minor 5ss

44.4

-0.6

2.8

55.8

43.2

Minor BPS

45.7

-0.3

2.6

66.21

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031376

4006630 - 4015116

8487

ENSAPLT00000000594

4006633 - 4015116

8484

ENSAPLT00000046958

4005223 - 4015116

9894