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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4009268_4009999_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4009268 - 4009999

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCTTTTGGG

5'SS Class:

weak_major

3'SS Sequence:

GCTTGCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

TTGTGTTGAATG

Flanking Amino Acid:

QLIEAYNCVVIYEIFQWSLA

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.4

46.6

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

0.49

0.9

64.6

36.6

Minor 5ss

24.4

-2.9

3.7

29.5

37.9

Minor BPS

49.7

-0.1

1.9

59.51

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046958

4005223 - 4015116

9894

ENSAPLT00000031376

4006630 - 4015116

8487