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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4043359_4044063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4043359 - 4044063

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTT

5'SS Class:

major

3'SS Sequence:

TTTCCACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TGTTTTTCCACT

Flanking Amino Acid:

TTLLGFPLKKGSIVLPNIAS

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

38.7

Major BPS

58.9

0.22

49.8

35.1

Major PPT

84.9

0.79

0.7

81.9

28.8

Minor 5ss

40.9

-1

3.7

64.2

47.3

Minor BPS

52.2

0.15

76.21

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017075

4032421 - 4045527

13107