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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4044206_4044885_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4044206 - 4044885

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GATTCGCTCACT

Flanking Amino Acid:

SQEAFLPFSIGHRVCLGEHL

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

79.2

0.66

0.8

72.8

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

45.1

-0.3

2.6

70.79

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017075

4032421 - 4045527

13107