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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4046822_4058242_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

4046822 - 4058242

Intron Length:

11421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTTAT

5'SS Class:

major

3'SS Sequence:

CAAACTCCGAAAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

LYMKIIDRTRACQQFPPGPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.1

74.9

38.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

48.1

-0.1

1.1

44.9

36.2

Minor 5ss

-1.1

3.2

48.8

47.3

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017146

4046688 - 4065671

18984