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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4060306_4061522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4060306 - 4061522

Intron Length:

1217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCATTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTGTATGTCATT

Flanking Amino Acid:

FRFAGSFIYQLYEIFPWLMC

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.5

30.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

76.4

0.59

0.9

69.7

36.6

Minor 5ss

28.5

-2.5

2.8

32.8

42.1

Minor BPS

43.6

-0.4

2.4

67.86

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017146

4046688 - 4065671

18984