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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4062237_4063152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4062237 - 4063152

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TATTTCTCCACA

Flanking Amino Acid:

LYMVVYPDIQEKVQKELDAV

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

82.2

0.73

0.8

76.9

31.5

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

55.9

0.18

72.46

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017146

4046688 - 4065671

18984