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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4107562_4107843_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4107562 - 4107843

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTGCC

5'SS Class:

major

3'SS Sequence:

ACACTGTGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATCAG

U12 Branch Point Sequence:

GGGACCAGGACC

Flanking Amino Acid:

THSMSQRVRQVWLHLLPRYL

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

66.4

40.8

Major BPS

48.6

-0

1.7

59.7

46.7

Major PPT

58.9

0.2

49.7

43.1

Minor 5ss

38.4

-1.3

3.3

53.8

43.4

Minor BPS

44.2

-0.4

1.8

50.34

39.6

Associated Gene:

Gene:

CHRNG

Ensembl Gene ID:

ENSAPLG00000019862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020056

4107449 - 4112146

4698