Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_4108776_4109574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4108776 - 4109574

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCCCA

5'SS Class:

major

3'SS Sequence:

CCCTGCGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

GAGGACTCACCT

Flanking Amino Acid:

WISIDPEAFTENGEWAIKHR

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.3

53.4

45.6

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

61.6

0.26

1.1

56.4

38.8

Minor 5ss

42.3

-0.9

3.2

57.3

46.9

Minor BPS

42.4

-0.5

55.22

Associated Gene:

Gene:

CHRNG

Ensembl Gene ID:

ENSAPLG00000019862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020056

4107449 - 4112146

4698