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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4112147_4112427_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4112147 - 4112427

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGCCTC

5'SS Class:

weak_major

3'SS Sequence:

GCTCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

TGCTCCTGGCTC

Flanking Amino Acid:

HGLASRVTPAREGQLEPRGP

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.2

1.3

54.4

44.7

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

70.9

0.47

0.8

61.5

34.9

Minor 5ss

38.9

-1.3

3.2

55.5

42.1

Minor BPS

40.2

-0.7

3.4

58.79

40.8

Associated Gene:

Gene:

CHRND

Ensembl Gene ID:

ENSAPLG00000028659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038431

4111902 - 4115835

3934