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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4112345_4112427_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4112345 - 4112427

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGCCTC

5'SS Class:

weak_major

3'SS Sequence:

TTGTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGCCCTCTGAGG

Flanking Amino Acid:

HGLASRVTPARLAPAGTSEE

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.2

1.3

54.4

44.7

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

71.9

0.49

0.9

62.7

39.7

Minor 5ss

38.9

-1.3

3.2

55.5

42.1

Minor BPS

42.4

-0.7

1.9

45.26

41.2

Associated Gene:

Gene:

CHRND

Ensembl Gene ID:

ENSAPLG00000028659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028884

4111964 - 4115835

3872