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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4112840_4112935_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4112840 - 4112935

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

AACGCCACCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCGCAT

U12 Branch Point Sequence:

GCATCCCCACCC

Flanking Amino Acid:

ETSHAIPLIGKYLLFIMLLV

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.2

36.1

Major BPS

54.8

0.12

1.5

65.3

43.7

Major PPT

0.14

0.9

44.4

36.6

Minor 5ss

33.1

-1.9

37.7

Minor BPS

43.8

-0.4

2.1

53.21

43.8

Associated Gene:

Gene:

CHRND

Ensembl Gene ID:

ENSAPLG00000028659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038431

4111902 - 4115835

3934

ENSAPLT00000028884

4111964 - 4115835

3872