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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4113048_4113314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4113048 - 4113314

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

ACCTGCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAC

U12 Branch Point Sequence:

CTGAGCTTACCT

Flanking Amino Acid:

AILVFYLPADSGEKMTLVIS

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

60.7

38.7

Major BPS

57.6

0.19

1.1

49.1

37.7

Major PPT

72.1

0.5

0.9

61.9

39.4

Minor 5ss

29.8

-2.3

3.2

40.1

Minor BPS

48.7

-0

2.1

68.01

48.5

Associated Gene:

Gene:

CHRND

Ensembl Gene ID:

ENSAPLG00000028659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038431

4111902 - 4115835

3934

ENSAPLT00000028884

4111964 - 4115835

3872