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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4113516_4113635_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4113516 - 4113635

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGCGTTG

5'SS Class:

weak_major

3'SS Sequence:

AATGTCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

AATGTCCCAACA

Flanking Amino Acid:

WIIIDPEGFTENGEWEIIHR

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.05

1.5

52.2

47.1

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

63.3

0.3

56.3

39.2

Minor 5ss

39.9

-1.1

3.5

55.5

48.8

Minor BPS

46.8

-0.2

1.9

59.82

39.7

Associated Gene:

Gene:

CHRND

Ensembl Gene ID:

ENSAPLG00000028659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038431

4111902 - 4115835

3934

ENSAPLT00000028884

4111964 - 4115835

3872