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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4114058_4114181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4114058 - 4114181

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGCCCT

5'SS Class:

major

3'SS Sequence:

TTCTCCCTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTACCAC

U12 Branch Point Sequence:

CTGCTACCACCT

Flanking Amino Acid:

LWLPEIVLENNNDGLFEVAY

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

65.1

40.7

Major BPS

47.3

-0.1

1.3

56.2

Major PPT

81.8

0.72

0.7

76.8

25.1

Minor 5ss

36.8

-1.5

3.2

49.3

40.8

Minor BPS

35.8

-1

51.03

42.9

Associated Gene:

Gene:

CHRND

Ensembl Gene ID:

ENSAPLG00000028659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038431

4111902 - 4115835

3934

ENSAPLT00000028884

4111964 - 4115835

3872