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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4114716_4115147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4114716 - 4115147

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CCGTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TCTGCCTGACCC

Flanking Amino Acid:

LALLGALVVWGGLCVNQEER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

51.1

0.03

1.2

39.9

Major PPT

64.4

0.32

0.9

36.6

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

53.4

0.09

1.9

66.78

44.8

Associated Gene:

Gene:

CHRND

Ensembl Gene ID:

ENSAPLG00000028659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038431

4111902 - 4115835

3934

ENSAPLT00000028884

4111964 - 4115835

3872