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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4179679_4196420_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4179679 - 4196420

Intron Length:
16742

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATGAGAT

5'SS Class:
major

3'SS Sequence:
TGTGCAATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTGAC

U12 Branch Point Sequence:
CTTTGTGCAATT

Flanking Amino Acid:
DALSCKQLPDGNFEVGVHIA

Intron Amino Acid Position:
246

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1
68.1
36.9

Major BPS
73.6
0.59
0.9
63.3
35.6

Major PPT
72.3
0.5
1
67.4
42.7

Minor 5ss
38.7
-1.3
3.5
56.1
48.1

Minor BPS
43.6
-0.4
2.4
67.06
44.8

Associated Gene:

Gene:
DIS3L2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4138734 - 4233102
94369