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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4196501_4211621_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4196501 - 4211621

Intron Length:
15121

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACAGCA

5'SS Class:
major

3'SS Sequence:
TTTTCTTGGATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GATAAAT

U12 Branch Point Sequence:
TTTTCTTGGATA

Flanking Amino Acid:
PRELAKRRDLRKECIFTIDP

Intron Amino Acid Position:
219

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1.1
68.7
36.4

Major BPS
56.8
0.17
1.2
65.3
38.6

Major PPT
73.6
0.53
1
72.7
37.6

Minor 5ss
36.3
-1.6
3.3
48.6
47.1

Minor BPS
68
0.56
1.4
78.67
31.2

Associated Gene:

Gene:
DIS3L2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4138734 - 4233102
94369