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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4268205_4273857_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4268205 - 4273857

Intron Length:

5653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCTAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATAAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

AGLKRGELIQGPLRINPKKY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.2

65.2

42.4

Major BPS

57.5

0.19

1.3

60.2

42.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

34.1

-1.8

2.9

42.9

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025905

4263893 - 4274348

10456