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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4303334_4304511_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4303334 - 4304511

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTTTTTAG

5'SS Class:

weak_major

3'SS Sequence:

GCACCGGCCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGAGAA

U12 Branch Point Sequence:

AGAAGGAGAAGG

Flanking Amino Acid:

RGARQGPPSRGEAREARAET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.3

52.5

40.9

Major BPS

42.4

-0.4

1.1

30.2

33.7

Major PPT

53.6

0.08

42.1

38.3

Minor 5ss

41.6

-0.9

2.4

44.8

Minor BPS

26.5

-1.9

2.2

26.16

34.4

Associated Gene:

Gene:

NPPC

Ensembl Gene ID:

ENSAPLG00000027049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030450

4303119 - 4304680

1562