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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4312650_4312706_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4312650 - 4312706

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCTAACAAA

5'SS Class:

weak_major

3'SS Sequence:

CAACTAACATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TTGATACCAACT

Flanking Amino Acid:

DCPSPKAVPHAILERDKAGL

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.5

52.5

40.1

Major BPS

0.45

0.9

67.6

25.3

Major PPT

57.1

0.16

53.5

Minor 5ss

26.5

-2.7

3.8

36.4

40.8

Minor BPS

44.3

-0.3

2.1

66.92

43.2

Associated Gene:

Gene:

COPS7B

Ensembl Gene ID:

ENSAPLG00000012548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030972

4312530 - 4322764

10235