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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4319247_4319822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4319247 - 4319822

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAC

U12 Branch Point Sequence:

GTGAGCTTACTC

Flanking Amino Acid:

TIVSLASRMKCIPYSVLLKD

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

32.3

Major BPS

57.6

0.19

1.1

49.1

37.7

Major PPT

78.9

0.65

0.9

77.1

37.1

Minor 5ss

37.8

-1.4

3.5

49.2

Minor BPS

46.2

-0.3

55.35

43.3

Associated Gene:

Gene:

COPS7B

Ensembl Gene ID:

ENSAPLG00000012548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033565

4316060 - 4326137

10078

ENSAPLT00000030972

4312530 - 4322764

10235