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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4319247_4321297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4319247 - 4321297

Intron Length:

2051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTTAC

U12 Branch Point Sequence:

GTGAGCTTACTC

Flanking Amino Acid:

FAYGTYPDYVVHSLLCVAEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

57.6

0.19

1.1

49.1

37.7

Major PPT

78.9

0.65

0.9

77.1

37.1

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

46.2

-0.3

55.35

43.3

Associated Gene:

Gene:

COPS7B

Ensembl Gene ID:

ENSAPLG00000012548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022362

4319173 - 4322764

3592