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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4321374_4322602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4321374 - 4322602

Intron Length:

1229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAT

U12 Branch Point Sequence:

TTCCATGGGATT

Flanking Amino Acid:

ELLELANVQELAEGTNAAYF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

59.5

0.24

1.5

72.5

43.5

Major PPT

73.1

0.52

0.9

65.5

36.1

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

39.3

-0.7

2.1

57.55

39.7

Associated Gene:

Gene:

COPS7B

Ensembl Gene ID:

ENSAPLG00000012548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030972

4312530 - 4322764

10235

ENSAPLT00000022362

4319173 - 4322764

3592