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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4362830_4364431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4362830 - 4364431

Intron Length:

1602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TTTCCTTCCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TCTTCTAACACC

Flanking Amino Acid:

ESQMMPANVLTGNVIIETKF

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

84.8

0.78

0.7

80.7

24.4

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

45.3

-0.3

2.3

62.36

43.6

Associated Gene:

Gene:

PDE6D

Ensembl Gene ID:

ENSAPLG00000012446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012952

4353918 - 4364513

10596