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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4433723_4433955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4433723 - 4433955

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

ACCCCCCCATCT

Flanking Amino Acid:

MVKIAKTPKNQVKQKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

82.1

0.72

0.7

74.2

30.9

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

42.3

-0.5

56.93

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013467

4433705 - 4440944

7240